The pipeline creates 2 folders: results and work. The files in results are symlinks in works. We highly recommend to not remove work folder.

To transfert or copy-paste the results folder, please use one of the following commands:

# On local computer
$> cp -rL results NEW_PATH/results

# On HPC
$> rsync -rL login@adress:/HPC_PATH/results NEW_PATH/results
# Or compress before and rsync after
$> tar cvzfh /HPC_PATH/results.tar.gz /HPC_PATH/results
$> rsync login@adress:/HPC_PATH/results.tar.gz NEW_PATH/results.tar.gz